U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX2911945: RNA-seq of Myotis myotis: Pseudogymnoascus destructans inoculated replicate 4 (end of hibernation)
1 ILLUMINA (Illumina HiSeq 2500) run: 29.4M spots, 8.9G bases, 4.8Gb downloads

Design: Poly(A) mRNA was enriched using oligo dT-beads and cDNA libraries were prepared using the TruSeq Stranded mRNA Library Preparation kit.
Submitted by: Trent University
Study: Host response to white-nose syndrome
show Abstracthide Abstract
Mitigation of emerging infectious diseases that threaten global biodiversity requires an understanding of critical host and pathogen responses to infection. For multi-host pathogens where pathogen virulence or host susceptibility is variable, host-pathogen interactions in tolerant species may identify potential avenues for adaptive evolution in recently-exposed, susceptible hosts. For example, the fungus Pseudogymnoascus destructans causes white-nose syndrome (WNS) in hibernating bats and is responsible for catastrophic declines in some species in North America, where it was recently introduced. Bats in Europe and Asia, where the pathogen is endemic, are only mildly affected. Different environmental conditions among Nearctic and Palearctic hibernacula have been proposed as an explanation for variable disease outcomes, but this hypothesis has not been experimentally tested. We report the first controlled, experimental investigation of response to P. destructans in a tolerant, European species of bat (the greater mouse-eared bat, Myotis myotis). We compared body condition, disease outcomes and gene expression in control (sham-exposed) and exposed M. myotis that hibernated under controlled environmental conditions following treatment. Tolerant M. myotis experienced extremely limited fungal growth, and did not exhibit symptoms of WNS. However, we detected no differential expression of genes associated with immune response in exposed bats, indicating that immune response does not drive tolerance of P. destructans in late hibernation. Variable responses to P. destructans among bat species cannot be attributed solely to environmental or ecological factors. Instead, our results implicate co-evolution with the pathogen, and highlight the dynamic nature of the “white-nose syndrome transcriptome”. Interspecific variation in response to exposure by the host (and possibly pathogen) emphasizes the importance of context in studies of the bat-WNS system, and robust characterization of genetic responses to exposure in various hosts and the pathogen should precede any attempts to use particular bat species as generalizable “model hosts”.
Sample: RNA was extracted from wing tissue. Poly(A) mRNA was enriched using oligo dT-beads and cDNA libraries were prepared using the TruSeq Stranded mRNA Library Preparation kit. Barcoded libraries were pooled and sequenced on a HiSeq 2500 System to generate 150 bp paired-end reads.
SAMN07222777 • SRS2278340 • All experiments • All runs
Organism: Myotis myotis
Library:
Name: Mymy-Pos4
Instrument: Illumina HiSeq 2500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 29.4M spots, 8.9G bases, 4.8Gb
Run# of Spots# of BasesSizePublished
SRR567638829,430,0808.9G4.8Gb2017-06-30

ID:
4162748

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...